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» The Distribution of Genomic Distance between Random Genomes
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BMCBI
2008
110views more  BMCBI 2008»
13 years 7 months ago
Determining significance of pairwise co-occurrences of events in bursty sequences
Background: Event sequences where different types of events often occur close together arise, e.g., when studying potential transcription factor binding sites (TFBS, events) of ce...
Niina Haiminen, Heikki Mannila, Evimaria Terzi
WSC
2008
13 years 10 months ago
SR-1: A simulation-based algorithm for the Capacitated Vehicle Routing Problem
In this paper we present SR-1, a simulation-based heuristic algorithm for the Capacitated Vehicle Routing Problem (CVRP). Given a CVRP instance, SR-1 uses an initial "good so...
Javier Faulin, Miquel Gilibert, Angel A. Juan, Xav...
ISBI
2008
IEEE
14 years 8 months ago
Statistical colocalization in biological imaging with false discovery control
In this paper, we present a novel object-based statistical colocalization method. Our colocalization relies on multiple hypothesis tests on the distances between all pairs of the ...
Bo Zhang, Nicolas Chenouard, Jean-Christophe Olivo...
BMCBI
2010
152views more  BMCBI 2010»
13 years 7 months ago
Apples and oranges: avoiding different priors in Bayesian DNA sequence analysis
Background: One of the challenges of bioinformatics remains the recognition of short signal sequences in genomic DNA such as donor or acceptor splice sites, splicing enhancers or ...
Jens Keilwagen, Jan Grau, Stefan Posch, Ivo Grosse
BMCBI
2005
103views more  BMCBI 2005»
13 years 7 months ago
SeqDoC: rapid SNP and mutation detection by direct comparison of DNA sequence chromatograms
Background: This paper describes SeqDoC, a simple, web-based tool to carry out direct comparison of ABI sequence chromatograms. This allows the rapid identification of single nucl...
Mark L. Crowe