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RECOMB
2004
Springer
14 years 9 months ago
Aligning alignments exactly
d abstract) John Kececioglu and Dean Starrett Department of Computer Science The University of Arizona Tucson AZ 85721, USA A basic computational problem that arises in both the...
John D. Kececioglu, Dean Starrett
RECOMB
2003
Springer
14 years 9 months ago
Designing seeds for similarity search in genomic DNA
Large-scale comparison of genomic DNA is of fundamental importance in annotating functional elements of genomes. To perform large comparisons efficiently, BLAST (Methods: Companio...
Jeremy Buhler, Uri Keich, Yanni Sun
CADE
2006
Springer
14 years 9 months ago
Inferring Network Invariants Automatically
Abstract. Verification by network invariants is a heuristic to solve uniform verification of parameterized systems. Given a system P, a network invariant for P is that abstracts th...
Olga Grinchtein, Martin Leucker, Nir Piterman
CADE
2001
Springer
14 years 9 months ago
Context Trees
Context trees are a popular and effective tool for tasks such as compression, sequential prediction, and language modeling. We present an algebraic perspective of context trees for...
Harald Ganzinger, Robert Nieuwenhuis, Pilar Nivela
STOC
2001
ACM
151views Algorithms» more  STOC 2001»
14 years 9 months ago
On the cell probe complexity of membership and perfect hashing
We study two fundamental static data structure problems, membership and perfect hashing, in Yao's cell probe model. The first space and bit probe optimal worst case upper bou...
Rasmus Pagh