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» The Equivalence between Biology and Computation
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HYBRID
2004
Springer
14 years 4 months ago
Dynamic Partitioning of Large Discrete Event Biological Systems for Hybrid Simulation and Analysis
Abstract. Biological systems involving genetic reactions are large discrete event systems, and often contain certain species that occur in small quantities, and others that occur i...
Natasha A. Neogi
RECOMB
2005
Springer
14 years 11 months ago
The Factor Graph Network Model for Biological Systems
Abstract. We introduce an extended computational framework for studying biological systems. Our approach combines formalization of existing qualitative models that are in wide but ...
Irit Gat-Viks, Amos Tanay, Daniela Raijman, Ron Sh...
DIS
2005
Springer
14 years 4 months ago
Exploring Predicate-Argument Relations for Named Entity Recognition in the Molecular Biology Domain
In this paper, the semantic relationships between a predicate and its arguments in terms of semantic roles are employed to improve lexical-based named entity recognition (NER) in t...
Tuangthong Wattarujeekrit, Nigel Collier
SWARM
2008
SPRINGER
222views Optimization» more  SWARM 2008»
13 years 10 months ago
Biologically inspired redistribution of a swarm of robots among multiple sites
We present a biologically inspired approach to the dynamic assignment and reassignment of a homogeneous swarm of robots to multiple locations, which is relevant to applications lik...
M. Ani Hsieh, Ádám M. Halász,...
TC
2010
13 years 9 months ago
Network-on-Chip Hardware Accelerators for Biological Sequence Alignment
—The most pervasive compute operation carried out in almost all bioinformatics applications is pairwise sequence homology detection (or sequence alignment). Due to exponentially ...
Souradip Sarkar, Gaurav Ramesh Kulkarni, Partha Pr...