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» The Evolution of Concurrent Programs
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PPOPP
2012
ACM
12 years 5 months ago
Deterministic parallel random-number generation for dynamic-multithreading platforms
Existing concurrency platforms for dynamic multithreading do not provide repeatable parallel random-number generators. This paper proposes that a mechanism called pedigrees be bui...
Charles E. Leiserson, Tao B. Schardl, Jim Sukha
CGO
2010
IEEE
14 years 4 months ago
Automatic creation of tile size selection models
Tiling is a widely used loop transformation for exposing/exploiting parallelism and data locality. Effective use of tiling requires selection and tuning of the tile sizes. This is...
Tomofumi Yuki, Lakshminarayanan Renganarayanan, Sa...
OOPSLA
2005
Springer
14 years 3 months ago
Micro patterns in Java code
Micro patterns are similar to design patterns, except that micro patterns stand at a lower, closer to the implementation, level of abstraction. Micro patterns are also unique in t...
Joseph Gil, Itay Maman
BMCBI
2006
139views more  BMCBI 2006»
13 years 10 months ago
Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise li
Background: Multiple sequence alignment (MSA) is a useful tool in bioinformatics. Although many MSA algorithms have been developed, there is still room for improvement in accuracy...
Shinsuke Yamada, Osamu Gotoh, Hayato Yamana
BMCBI
2007
152views more  BMCBI 2007»
13 years 10 months ago
Recodon: Coalescent simulation of coding DNA sequences with recombination, migration and demography
Background: Coalescent simulations have proven very useful in many population genetics studies. In order to arrive to meaningful conclusions, it is important that these simulation...
Miguel Arenas, David Posada