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BMCBI
2007
165views more  BMCBI 2007»
15 years 5 months ago
Ab initio identification of human microRNAs based on structure motifs
Background: MicroRNAs (miRNAs) are short, non-coding RNA molecules that are directly involved in post-transcriptional regulation of gene expression. The mature miRNA sequence bind...
Markus Brameier, Carsten Wiuf
WWW
2010
ACM
16 years 19 days ago
A scalable machine-learning approach for semi-structured named entity recognition
Named entity recognition studies the problem of locating and classifying parts of free text into a set of predefined categories. Although extensive research has focused on the de...
Utku Irmak, Reiner Kraft
CPAIOR
2009
Springer
16 years 7 days ago
Modelling Search Strategies in Rules2CP
In this abstract, we present a rule-based modelling language for constraint programming, called Rules2CP [1], and a library PKML for modelling packing problems. Unlike other modell...
François Fages, Julien Martin
BMCBI
2006
102views more  BMCBI 2006»
15 years 5 months ago
Predicting population coverage of T-cell epitope-based diagnostics and vaccines
Background: T cells recognize a complex between a specific major histocompatibility complex (MHC) molecule and a particular pathogen-derived epitope. A given epitope will elicit a...
Huynh-Hoa Bui, John Sidney, Kenny Dinh, Scott Sout...
HPCC
2007
Springer
15 years 11 months ago
Optimizing Array Accesses in High Productivity Languages
One of the outcomes of DARPA’s HPCS program has been the creation of three new high productivity languages: Chapel, Fortress, and X10. While these languages have introduced impro...
Mackale Joyner, Zoran Budimlic, Vivek Sarkar