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ICASSP
2011
IEEE
13 years 10 days ago
Uncover cooperative gene regulations by microRNAs and transcription factors in glioblastoma using a nonnegative hybrid factor mo
—Transcriptional regulation by transcription factors (TFs) and microRNAs controls when and how much RNA is created. Due to technical limitations, the protein level expressions of...
Jia Meng, Hung-I Harry Chen, Jianqiu Zhang, Yidong...
COMPLEX
2009
Springer
14 years 16 days ago
A Comparative Analysis of Specific Spatial Network Topological Models
Creating ensembles of random but "realistic" topologies for complex systems is crucial for many tasks such as benchmark generation and algorithm analysis. In general, exp...
Jun Wang, Gregory M. Provan
BMCBI
2008
208views more  BMCBI 2008»
13 years 8 months ago
GraphFind: enhancing graph searching by low support data mining techniques
Background: Biomedical and chemical databases are large and rapidly growing in size. Graphs naturally model such kinds of data. To fully exploit the wealth of information in these...
Alfredo Ferro, Rosalba Giugno, Misael Mongiov&igra...
CORR
2011
Springer
149views Education» more  CORR 2011»
13 years 3 months ago
General Iteration graphs and Boolean automata circuits
This article is set in the eld of regulation networks modeled by discrete dynamical systems. It focuses on Boolean automata networks. In such networks, there are many ways to upd...
Mathilde Noual
BMCBI
2007
215views more  BMCBI 2007»
13 years 8 months ago
Learning causal networks from systems biology time course data: an effective model selection procedure for the vector autoregres
Background: Causal networks based on the vector autoregressive (VAR) process are a promising statistical tool for modeling regulatory interactions in a cell. However, learning the...
Rainer Opgen-Rhein, Korbinian Strimmer