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CORR
2008
Springer
113views Education» more  CORR 2008»
13 years 8 months ago
Self-Stabilizing Pulse Synchronization Inspired by Biological Pacemaker Networks
We define the "Pulse Synchronization" problem that requires nodes to achieve tight synchronization of regular pulse events, in the settings of distributed computing syste...
Ariel Daliot, Danny Dolev, Hanna Parnas
NIPS
2000
13 years 10 months ago
Processing of Time Series by Neural Circuits with Biologically Realistic Synaptic Dynamics
Experimental data show that biological synapses behave quite differently from the symbolic synapses in common artificial neural network models. Biological synapses are dynamic, i....
Thomas Natschläger, Wolfgang Maass, Eduardo D...
TCS
2011
13 years 3 months ago
An algorithmic framework for network reconstruction
Models of biological systems and phenomena are of high scientific interest and practical relevance, but not always easy to obtain due to their inherent complexity. To gain the re...
Markus Durzinsky, Annegret Wagler, Robert Weismant...
FM
2009
Springer
138views Formal Methods» more  FM 2009»
14 years 3 months ago
What Can Formal Methods Bring to Systems Biology?
This position paper argues that the operational modelling approaches from the formal methods community can be applied fruitfully within the systems biology domain. The results can ...
Nicola Bonzanni, K. Anton Feenstra, Wan Fokkink, E...
VRML
2004
ACM
14 years 2 months ago
PathSim visualizer: an Information-Rich Virtual Environment framework for systems biology
Increasingly, biology researchers and medical practitioners are using computational tools to model and analyze dynamic systems across scales from the macro to the cellular to the ...
Nicholas F. Polys, Doug A. Bowman, Chris North, Re...