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» The Factor Graph Network Model for Biological Systems
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ICTAC
2005
Springer
14 years 2 months ago
Stochastic Analysis of Graph Transformation Systems: A Case Study in P2P Networks
In distributed and mobile systems with volatile bandwidth and fragile connectivity, non-functional aspects like performance and reliability become more and more important. To forma...
Reiko Heckel
ICML
2005
IEEE
14 years 9 months ago
Predicting protein folds with structural repeats using a chain graph model
Protein fold recognition is a key step towards inferring the tertiary structures from amino-acid sequences. Complex folds such as those consisting of interacting structural repeat...
Yan Liu, Eric P. Xing, Jaime G. Carbonell
BMCBI
2010
118views more  BMCBI 2010»
13 years 8 months ago
svdPPCS: an effective singular value decomposition-based method for conserved and divergent co-expression gene module identifica
Background: Comparative analysis of gene expression profiling of multiple biological categories, such as different species of organisms or different kinds of tissue, promises to e...
Wensheng Zhang, Andrea Edwards, Wei Fan, Dongxiao ...
ESANN
2006
13 years 10 months ago
Cluster detection algorithm in neural networks
Complex networks have received much attention in the last few years, and reveal global properties of interacting systems in domains like biology, social sciences and technology. O...
David Meunier, Hélène Paugam-Moisy
NN
2006
Springer
13 years 8 months ago
Self-organizing neural networks to support the discovery of DNA-binding motifs
Identification of the short DNA sequence motifs that serve as binding targets for transcription factors is an important challenge in bioinformatics. Unsupervised techniques from t...
Shaun Mahony, Panayiotis V. Benos, Terry J. Smith,...