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BMCBI
2007
115views more  BMCBI 2007»
13 years 8 months ago
Correlation between structure and temperature in prokaryotic metabolic networks
Background: In recent years, an extensive characterization of network structures has been made in an effort to elucidate design principles of metabolic networks, providing valuabl...
Kazuhiro Takemoto, Jose C. Nacher, Tatsuya Akutsu
FMCO
2005
Springer
173views Formal Methods» more  FMCO 2005»
14 years 2 months ago
Cluster-Based LTL Model Checking of Large Systems
Abstract. In recent years a bundle of parallel and distributed algorithms for verification of finite state systems has appeared. We survey distributed-memory enumerative LTL mode...
Jiri Barnat, Lubos Brim, Ivana Cerná
IDEAL
2007
Springer
14 years 2 months ago
PINCoC : A Co-clustering Based Approach to Analyze Protein-Protein Interaction Networks
A novel technique to search for functional modules in a protein-protein interaction network is presented. The network is represented by the adjacency matrix associated with the und...
Clara Pizzuti, Simona E. Rombo
CSB
2002
IEEE
169views Bioinformatics» more  CSB 2002»
14 years 1 months ago
Bayesian Network and Nonparametric Heteroscedastic Regression for Nonlinear Modeling of Genetic Network
We propose a new statistical method for constructing a genetic network from microarray gene expression data by using a Bayesian network. An essential point of Bayesian network con...
Seiya Imoto, SunYong Kim, Takao Goto, Sachiyo Abur...
ICCABS
2011
13 years 15 days ago
High-performance biocomputing for simulating the spread of contagion over large contact networks
Abstract—Many important biological problems can be modeled as contagion diffusion processes over interaction networks. This paper shows how the EpiSimdemics interaction-based sim...
Keith R. Bisset, Ashwin M. Aji, Madhav V. Marathe,...