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NAR
2007
105views more  NAR 2007»
13 years 8 months ago
Onto-Tools: new additions and improvements in 2006
Onto-Tools is a freely available web-accessible software suite, composed of an annotation database and nine complementary data-mining tools. This article describes a new tool, Ont...
Purvesh Khatri, Calin Voichita, Khalid Kattan, Nad...
PVLDB
2008
111views more  PVLDB 2008»
13 years 8 months ago
Approximate lineage for probabilistic databases
In probabilistic databases, lineage is fundamental to both query processing and understanding the data. Current systems s.a. Trio or Mystiq use a complete approach in which the li...
Christopher Ré, Dan Suciu
CORR
2010
Springer
111views Education» more  CORR 2010»
13 years 6 months ago
Analysis Of Cancer Omics Data In A Semantic Web Framework
Our work concerns the elucidation of the cancer (epi)genome, transcriptome and proteome to better understand the complex interplay between a cancer cell's molecular state and ...
Matthew Holford, James P. McCusker, Kei-Hoi Cheung...
NAR
2011
157views Computer Vision» more  NAR 2011»
12 years 11 months ago
PlantTFDB 2.0: update and improvement of the comprehensive plant transcription factor database
We updated the plant transcription factor (TF) database to version 2.0 (PlantTFDB 2.0, http:// planttfdb.cbi.pku.edu.cn) which contains 53 319 putative TFs predicted from 49 speci...
He Zhang, Jinpu Jin, Liang Tang, Yi Zhao, Xiaochen...
BMCBI
2010
146views more  BMCBI 2010»
13 years 8 months ago
Revealing and avoiding bias in semantic similarity scores for protein pairs
Background: Semantic similarity scores for protein pairs are widely applied in functional genomic researches for finding functional clusters of proteins, predicting protein functi...
Jing Wang 0004, Xianxiao Zhou, Jing Zhu, Chenggui ...