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    BMCBI
    2007
    115views more  BMCBI 2007»
    Comparing sequences without using alignments: application to HIV/SIV subtyping
    13 years 9 months ago
    Comparing sequences without using alignments: application to HIV/SIV subtyping
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    Background: In general, the construction of trees is based on sequence alignments. This procedure, however, leads to loss of informationwhen parts of sequence alignments (for inst...
    Gilles Didier, Laurent Debomy, Maude Pupin, Ming Z...
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    BMCBI
    2007
    169views more  BMCBI 2007»
    Transcriptional regulatory network refinement and quantification through kinetic modeling, gene expression microarray data and i
    13 years 9 months ago
    Transcriptional regulatory network refinement and quantification through kinetic modeling, gene expression microarray data and i
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    Background: Gene expression microarray and other multiplex data hold promise for addressing the challenges of cellular complexity, refined diagnoses and the discovery of well-targ...
    Abdallah Sayyed-Ahmad, Kagan Tuncay, Peter J. Orto...
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    ECOOP
    2010
    Springer
    208views Programming Languages» more  ECOOP 2010»
    The Essence of JavaScript
    14 years 1 months ago
    The Essence of JavaScript
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    We reduce JavaScript to a core calculus structured as a small-step operational semantics. We present several peculiarities of the language and show that our calculus models them. W...
    Arjun Guha, Claudiu Saftoiu, Shriram Krishnamurthi
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    POPL
    2008
    ACM
    124views Programming Languages» more  POPL 2008»
    Engineering formal metatheory
    14 years 9 months ago
    Engineering formal metatheory
    Download  www.cis.upenn.edu
    Machine-checked proofs of properties of programming languages have become a critical need, both for increased confidence in large and complex designs and as a foundation for techn...
    Arthur Charguéraud, Benjamin C. Pierce, Bri...
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    POPL
    2007
    ACM
    126views Programming Languages» more  POPL 2007»
    A very modal model of a modern, major, general type system
    14 years 9 months ago
    A very modal model of a modern, major, general type system
    Download  www.cs.princeton.edu
    We present a model of recursive and impredicatively quantified types with mutable references. We interpret in this model all of the type constructors needed for typed intermediate...
    Andrew W. Appel, Christopher D. Richards, Jé...
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