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» The Implicit Pipeline Method
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LCTRTS
2009
Springer
14 years 4 months ago
Synergistic execution of stream programs on multicores with accelerators
The StreamIt programming model has been proposed to exploit parallelism in streaming applications on general purpose multicore architectures. The StreamIt graphs describe task, da...
Abhishek Udupa, R. Govindarajan, Matthew J. Thazhu...
CSB
2005
IEEE
168views Bioinformatics» more  CSB 2005»
14 years 3 months ago
cis-Regulatory Element Prediction in Mammalian Genomes
The identification of cis-regulatory elements and modules is an important step in understanding the regulation of genes. We have developed a pipeline capable of running multiple m...
Asim S. Siddiqui, Gordon Robertson, Misha Bilenky,...
DATE
2003
IEEE
102views Hardware» more  DATE 2003»
14 years 3 months ago
G-MAC: An Application-Specific MAC/Co-Processor Synthesizer
: A modern special-purpose processor (e.g., for image and graphical applications) usually contains a set of instructions supporting complex multiply-operations. These instructions ...
Alex C.-Y. Chang, Wu-An Kuo, Allen C.-H. Wu, TingT...
BMCBI
2010
145views more  BMCBI 2010»
13 years 10 months ago
WaveletQuant, an improved quantification software based on wavelet signal threshold de-noising for labeled quantitative proteomi
Background: Quantitative proteomics technologies have been developed to comprehensively identify and quantify proteins in two or more complex samples. Quantitative proteomics base...
Fan Mo, Qun Mo, Yuanyuan Chen, David R. Goodlett, ...
BMCBI
2008
204views more  BMCBI 2008»
13 years 10 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...