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BMCBI
2007
105views more  BMCBI 2007»
13 years 8 months ago
Text-derived concept profiles support assessment of DNA microarray data for acute myeloid leukemia and for androgen receptor sti
Background: High-throughput experiments, such as with DNA microarrays, typically result in hundreds of genes potentially relevant to the process under study, rendering the interpr...
Rob Jelier, Guido Jenster, Lambert C. J. Dorssers,...
BMCBI
2006
117views more  BMCBI 2006»
13 years 8 months ago
Incorporating background frequency improves entropy-based residue conservation measures
Background: Several entropy-based methods have been developed for scoring sequence conservation in protein multiple sequence alignments. High scoring amino acid positions may corr...
Kai Wang, Ram Samudrala
KAIS
2008
221views more  KAIS 2008»
13 years 8 months ago
Forecasting skewed biased stochastic ozone days: analyses, solutions and beyond
Much work on skewed, stochastic, high dimensional, and biased datasets usually implicitly solve each problem separately. Recently, we have been approached by Texas Commission on En...
Kun Zhang, Wei Fan
SIAMSC
2008
140views more  SIAMSC 2008»
13 years 8 months ago
Newton-GMRES Preconditioning for Discontinuous Galerkin Discretizations of the Navier--Stokes Equations
We study preconditioners for the iterative solution of the linear systems arising in the implicit time integration of the compressible Navier-Stokes equations. The spatial discreti...
Per-Olof Persson, Jaime Peraire
IPM
2007
95views more  IPM 2007»
13 years 8 months ago
Using structural contexts to compress semistructured text collections
We describe a compression model for semistructured documents, called Structural Contexts Model (SCM), which takes advantage of the context information usually implicit in the stru...
Joaquín Adiego, Gonzalo Navarro, Pablo de l...