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» The Inference Based on Molecular Computing
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TCBB
2008
122views more  TCBB 2008»
13 years 10 months ago
Mixed Integer Linear Programming for Maximum-Parsimony Phylogeny Inference
Reconstruction of phylogenetic trees is a fundamental problem in computational biology. While excellent heuristic methods are available for many variants of this problem, new adva...
Srinath Sridhar, Fumei Lam, Guy E. Blelloch, R. Ra...
BIBE
2005
IEEE
116views Bioinformatics» more  BIBE 2005»
14 years 3 months ago
Stochastic Model of Protease-Ligand Reactions
Prediction of protein tertiary structure based on amino acid sequence is one of the most challenging open questions in computational molecular biology. The two most common experim...
Paul E. Anderson, Douglas W. Raiford, Deacon J. Sw...
MOBICOM
2010
ACM
13 years 10 months ago
Inferring and mitigating a link's hindering transmissions in managed 802.11 wireless networks
In 802.11 managed wireless networks, the manager can address under-served links by rate-limiting the conflicting nodes. In order to determine to what extent each conflicting node ...
Eugenio Magistretti, Omer Gurewitz, Edward W. Knig...
BMCBI
2007
154views more  BMCBI 2007»
13 years 10 months ago
Inferring biological networks with output kernel trees
Background: Elucidating biological networks between proteins appears nowadays as one of the most important challenges in systems biology. Computational approaches to this problem ...
Pierre Geurts, Nizar Touleimat, Marie Dutreix, Flo...
ICSE
2007
IEEE-ACM
14 years 10 months ago
Path-Sensitive Inference of Function Precedence Protocols
Function precedence protocols define ordering relations among function calls in a program. In some instances, precedence protocols are well-understood (e.g., a call to pthread mut...
Murali Krishna Ramanathan, Ananth Grama, Suresh Ja...