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» The Logical Structure of Binding
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RECOMB
2005
Springer
14 years 7 months ago
Predicting Transcription Factor Binding Sites Using Structural Knowledge
Abstract. Current approaches for identification and detection of transcription factor binding sites rely on an extensive set of known target genes. Here we describe a novel structu...
Tommy Kaplan, Nir Friedman, Hanah Margalit
PERCOM
2004
ACM
14 years 7 months ago
XML Language Binding Support for Pervasive Communication in Distributed Virtual Shared Information Spaces
In this paper we show a novel middleware approach for pervasise applications that communicate via an XMLbased distributed virtual shared information space. This approach extends s...
Norbert Luttenberger, Florian Reuter, Jochen Kober...
CSR
2008
Springer
13 years 7 months ago
A Triple Correspondence in Canonical Calculi: Strong Cut-Elimination, Coherence, and Non-deterministic Semantics
An (n, k)-ary quantifier is a generalized logical connective, binding k variables and connecting n formulas. Canonical systems with (n, k)-ary quantifiers form a natural class of G...
Arnon Avron, Anna Zamansky
BMCBI
2007
128views more  BMCBI 2007»
13 years 7 months ago
A robust and efficient algorithm for the shape description of protein structures and its application in predicting ligand bindin
Background: An accurate description of protein shape derived from protein structure is necessary to establish an understanding of protein-ligand interactions, which in turn will l...
Lei Xie, Philip E. Bourne
BMCBI
2010
122views more  BMCBI 2010»
13 years 7 months ago
An automated framework for understanding structural variations in the binding grooves of MHC class II molecules
Background: MHC/HLA class II molecules are important components of the immune system and play a critical role in processes such as phagocytosis. Understanding peptide recognition ...
Kalidas Yeturu, Tapani Utriainen, Graham J. L. Kem...