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» The Motif Tracking Algorithm
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ICWSM
2010
13 years 11 months ago
TweetMotif: Exploratory Search and Topic Summarization for Twitter
We present TweetMotif, an exploratory search application for Twitter. Unlike traditional approaches to information retrieval, which present a simple list of messages, TweetMotif g...
Brendan O'Connor, Michel Krieger, David Ahn
BMCBI
2004
229views more  BMCBI 2004»
13 years 9 months ago
Automatic annotation of protein motif function with Gene Ontology terms
Background: Conserved protein sequence motifs are short stretches of amino acid sequence patterns that potentially encode the function of proteins. Several sequence pattern search...
Xinghua Lu, Chengxiang Zhai, Vanathi Gopalakrishna...
KDD
1997
ACM
161views Data Mining» more  KDD 1997»
14 years 1 months ago
Automated Discovery of Active Motifs in Three Dimensional Molecules
In this paper 1 we present a method for discovering approximately common motifs (also known as active motifs) in three dimensional (3D) molecules. Each node in a molecule is repre...
Xiong Wang, Jason Tsong-Li Wang, Dennis Shasha, Br...
WABI
2007
Springer
14 years 3 months ago
A Graph Clustering Approach to Weak Motif Recognition
The aim of the motif recognition problem is to detect a set of mutually similar subsequences within a collection of biological sequences. The weak motif recognition problem on DNA ...
Christina Boucher, Daniel G. Brown, Paul Church
BMCBI
2007
152views more  BMCBI 2007»
13 years 10 months ago
Bioinformatic identification of novel putative photoreceptor specific cis-elements
Background: Cell specific gene expression is largely regulated by different combinations of transcription factors that bind cis-elements in the upstream promoter sequence. However...
Charles G. Danko, Vera A. McIlvain, Maochun Qin, B...