The mechanism of gene regulation has been studied intensely for decades. It is important to identify synergistic transcriptional motifs. Its search space is so large that an effici...
Time series motifs are approximately repeated patterns found within the data. Such motifs have utility for many data mining algorithms, including rule-discovery, novelty-detection...
Dragomir Yankov, Eamonn J. Keogh, Jose Medina, Bil...
We develop, analyze and experiment with a new tool, called madmx, which extracts frequent motifs, possibly including don’t care characters, from biological sequences. We introduc...
Roberto Grossi, Andrea Pietracaprina, Nadia Pisant...
Background: An important step in annotation of sequenced genomes is the identification of transcription factor binding sites. More than a hundred different computational methods h...
Geir Kjetil Sandve, Osman Abul, Vegard Walseng, Fi...
— Protein sequence motifs information is crucial to the analysis of biologically significant regions. The conserved regions have the potential to determine the role of the protei...