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BMCBI
2004
95views more  BMCBI 2004»
13 years 7 months ago
PCOGR: Phylogenetic COG ranking as an online tool to judge the specificity of COGs with respect to freely definable groups of or
Background: The rapidly increasing number of completely sequenced genomes led to the establishment of the COG-database which, based on sequence homologies, assigns similar protein...
Florian Meereis, Michael Kaufmann
BMCBI
2004
177views more  BMCBI 2004»
13 years 7 months ago
Gapped alignment of protein sequence motifs through Monte Carlo optimization of a hidden Markov model
Background: Certain protein families are highly conserved across distantly related organisms and belong to large and functionally diverse superfamilies. The patterns of conservati...
Andrew F. Neuwald, Jun S. Liu
BMCBI
2004
150views more  BMCBI 2004»
13 years 7 months ago
SS-Wrapper: a package of wrapper applications for similarity searches on Linux clusters
Background: Large-scale sequence comparison is a powerful tool for biological inference in modern molecular biology. Comparing new sequences to those in annotated databases is a u...
Chunlin Wang, Elliot J. Lefkowitz
JUCS
2000
120views more  JUCS 2000»
13 years 7 months ago
Execution and Cache Performance of the Scheduled Dataflow Architecture
: This paper presents an evaluation of our Scheduled Dataflow (SDF) Processor. Recent focus in the field of new processor architectures is mainly on VLIW (e.g. IA-64), superscalar ...
Krishna M. Kavi, Joseph Arul, Roberto Giorgi
BC
1998
96views more  BC 1998»
13 years 7 months ago
Evidence of phase transitions in heart period dynamics
Complexity measures of non-linear dynamics are a useful tool for quantifying observed stretching, folding, scaling and mixing processes in the Takens-reconstructed state space of h...
Henrik Bettermann, Peter Van Leeuwen
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