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BIBE
2004
IEEE
128views Bioinformatics» more  BIBE 2004»
15 years 7 months ago
Towards a Proteomics Meta-Classification
There is a recognized need for a meta-classification that can serve as a foundation for more refined ontologies in the field of proteomics. Standard data sources classify proteins...
Anand Kumar, Barry Smith
BIOINFORMATICS
2008
135views more  BIOINFORMATICS 2008»
15 years 4 months ago
Message-passing algorithms for the prediction of protein domain interactions from protein-protein interaction data
Motivation: Cellular processes often hinge upon specific interactions among proteins, and knowledge of these processes at a system level constitutes a major goal of proteomics. In...
Mudassar Iqbal, Alex Alves Freitas, Colin G. Johns...
BMCBI
2008
97views more  BMCBI 2008»
15 years 4 months ago
Comparison study on k-word statistical measures for protein: From sequence to 'sequence space'
Background: Many proposed statistical measures can efficiently compare protein sequence to further infer protein structure, function and evolutionary information. They share the s...
Qi Dai, Tian-Ming Wang
BMCBI
2004
120views more  BMCBI 2004»
15 years 3 months ago
pdb-care (PDB CArbohydrate REsidue check): a program to support annotation of complex carbohydrate structures in PDB files
Background: Carbohydrates are involved in a variety of fundamental biological processes and pathological situations. They therefore have a large pharmaceutical and diagnostic pote...
Thomas Lütteke, Claus-Wilhelm von der Lieth
BMCBI
2007
227views more  BMCBI 2007»
15 years 4 months ago
Growing functional modules from a seed protein via integration of protein interaction and gene expression data
Background: Nowadays modern biology aims at unravelling the strands of complex biological structures such as the protein-protein interaction (PPI) networks. A key concept in the o...
Ioannis A. Maraziotis, Konstantina Dimitrakopoulou...