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BMCBI
2005
162views more  BMCBI 2005»
13 years 8 months ago
Accelerated probabilistic inference of RNA structure evolution
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
Ian Holmes
BMCBI
2005
152views more  BMCBI 2005»
13 years 8 months ago
Improved profile HMM performance by assessment of critical algorithmic features in SAM and HMMER
Background: Profile hidden Markov model (HMM) techniques are among the most powerful methods for protein homology detection. Yet, the critical features for successful modelling ar...
Markus Wistrand, Erik L. L. Sonnhammer
JPDC
2007
96views more  JPDC 2007»
13 years 8 months ago
Optimal pipeline decomposition and adaptive network mapping to support distributed remote visualization
This paper discusses algorithmic and implementation aspects of a distributed remote visualization system that optimally decomposes and adaptively maps the visualization pipeline t...
Mengxia Zhu, Qishi Wu, Nageswara S. V. Rao, S. Sit...
JPDC
2007
167views more  JPDC 2007»
13 years 8 months ago
On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
In this paper, we address the problem of multiple sequence alignment (MSA) for handling very large number of proteins sequences on mesh-based multiprocessor architectures. As the ...
Diana H. P. Low, Bharadwaj Veeravalli, David A. Ba...
TWC
2008
120views more  TWC 2008»
13 years 8 months ago
Binary Power Control for Sum Rate Maximization over Multiple Interfering Links
We consider allocating the transmit powers for a wireless multi-link (N-link) system, in order to maximize the total system throughput under interference and noise impairments, and...
Anders Gjendemsjø, David Gesbert, Geir E. &...
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