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WABI
2010
Springer
177views Bioinformatics» more  WABI 2010»
13 years 7 months ago
Estimation of Alternative Splicing isoform Frequencies from RNA-Seq Data
In this paper we present a novel expectation-maximization algorithm for inference of alternative splicing isoform frequencies from high-throughput transcriptome sequencing (RNA-Seq...
Marius Nicolae, Serghei Mangul, Ion I. Mandoiu, Al...
BMCBI
2010
95views more  BMCBI 2010»
13 years 8 months ago
An effective approach for identification of in vivo protein-DNA binding sites from paired-end ChIP-Seq data
Background: ChIP-Seq, which combines chromatin immunoprecipitation (ChIP) with high-throughput massively parallel sequencing, is increasingly being used for identification of prot...
Congmao Wang, Jie Xu, Dasheng Zhang, Zoe A. Wilson...
FPL
2010
Springer
188views Hardware» more  FPL 2010»
13 years 6 months ago
SeqHive: A Reconfigurable Computer Cluster for Genome Re-sequencing
We demonstrate how Field Programmable Gate Arrays (FPGAs) may be used to address the computing challenges associated with assembling genome sequences from recent ultra-high-through...
Kristian Stevens, Henry Chen, Terry Filiba, Peter ...
WACV
2005
IEEE
14 years 2 months ago
Handsignals Recognition From Video Using 3D Motion Capture Data
Hand signals are commonly used in applications such as giving instructions to a pilot for airplane takeoff or direction of a crane operator by a foreman on the ground. A new algor...
Tai-Peng Tian, Stan Sclaroff
IWPSE
2003
IEEE
14 years 1 months ago
CVS Release History Data for Detecting Logical Couplings
The dependencies and interrelations between classes and modules affect the maintainability of object-oriented systems. It is therefore important to capture weaknesses of the softw...
Harald Gall, Mehdi Jazayeri, Jacek Krajewski