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RECOMB
2006
Springer
14 years 10 months ago
Identifiability Issues in Phylogeny-Based Detection of Horizontal Gene Transfer
Prokaryotic organisms share genetic material across species boundaries by means of a process known as horizontal gene transfer (HGT). Detecting this process bears great significanc...
Cuong Than, Derek A. Ruths, Hideki Innan, Luay Nak...
RECOMB
2006
Springer
14 years 10 months ago
Efficient Enumeration of Phylogenetically Informative Substrings
We study the problem of enumerating substrings that are common amongst genomes that share evolutionary descent. For example, one might want to enumerate all identical (therefore co...
Stanislav Angelov, Boulos Harb, Sampath Kannan, Sa...
RECOMB
2005
Springer
14 years 10 months ago
RNA-RNA Interaction Prediction and Antisense RNA Target Search
Abstract. Recent studies demonstrating the existence of special non-coding "antisense" RNAs used in post-transcriptional gene regulation have received considerable attent...
Can Alkan, Emre Karakoç, Joseph H. Nadeau, ...
ICALP
2009
Springer
14 years 10 months ago
Functional Monitoring without Monotonicity
The notion of distributed functional monitoring was recently introduced by Cormode, Muthukrishnan and Yi [CMY08] to initiate a formal study of the communication cost of certain fu...
Chrisil Arackaparambil, Joshua Brody, Amit Chakrab...
SIGMOD
2009
ACM
190views Database» more  SIGMOD 2009»
14 years 10 months ago
Optimizing complex extraction programs over evolving text data
Most information extraction (IE) approaches have considered only static text corpora, over which we apply IE only once. Many real-world text corpora however are dynamic. They evol...
Fei Chen 0002, Byron J. Gao, AnHai Doan, Jun Yang ...
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