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ALMOB
2007
111views more  ALMOB 2007»
13 years 8 months ago
Transcriptional regulatory network discovery via multiple method integration: application to e. coli K12
Motivation: Transcriptional regulatory network (TRN) discovery from one method (e.g. microarray analysis, gene ontology, phylogenic similarity) does not seem feasible due to lack ...
Jingjun Sun, Kagan Tuncay, Alaa Abi Haidar, Lisa E...
BMCBI
2007
146views more  BMCBI 2007»
13 years 8 months ago
Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
BMCBI
2007
95views more  BMCBI 2007»
13 years 8 months ago
Phylogenetic tree information aids supervised learning for predicting protein-protein interaction based on distance matrices
Background: Protein-protein interactions are critical for cellular functions. Recently developed computational approaches for predicting protein-protein interactions utilize co-ev...
Roger A. Craig, Li Liao
TJS
2002
105views more  TJS 2002»
13 years 7 months ago
Design and Prototype of a Performance Tool Interface for OpenMP
This paper proposes a performance tools interface for OpenMP, similar in spirit to the MPI profiling interface in its intent to define a clear and portable API that makes OpenMP ex...
Bernd Mohr, Allen D. Malony, Sameer Shende, Felix ...
TKDE
2008
141views more  TKDE 2008»
13 years 7 months ago
Location Fingerprinting In A Decorrelated Space
We present a novel approach to the problem of the indoor localization in wireless environments. The main contribution of this paper is four folds: (a) We show that, by projecting t...
Shih-Hau Fang, Tsung-Nan Lin, Po-Chiang Lin