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BMCBI
2010
100views more  BMCBI 2010»
15 years 6 months ago
Trimming of mammalian transcriptional networks using network component analysis
Background: Network Component Analysis (NCA) has been used to deduce the activities of transcription factors (TFs) from gene expression data and the TF-gene binding relationship. ...
Linh M. Tran, Daniel R. Hyduke, James C. Liao
BMCBI
2008
158views more  BMCBI 2008»
15 years 6 months ago
Analyzing M-CSF dependent monocyte/macrophage differentiation: Expression modes and meta-modes derived from an independent compo
Background: The analysis of high-throughput gene expression data sets derived from microarray experiments still is a field of extensive investigation. Although new approaches and ...
Dominik Lutter, Peter Ugocsai, Margot Grandl, Evel...
CSB
2005
IEEE
146views Bioinformatics» more  CSB 2005»
15 years 11 months ago
Multi-Metric and Multi-Substructure Biclustering Analysis for Gene Expression Data
A good number of biclustering algorithms have been proposed for grouping gene expression data. Many of them have adopted matrix norms to define the similarity score of a bicluste...
Sun-Yuan Kung, Man-Wai Mak, Ilias Tagkopoulos
BMCBI
2008
178views more  BMCBI 2008»
15 years 6 months ago
Identification of coherent patterns in gene expression data using an efficient biclustering algorithm and parallel coordinate vi
Background: The DNA microarray technology allows the measurement of expression levels of thousands of genes under tens/hundreds of different conditions. In microarray data, genes ...
Kin-On Cheng, Ngai-Fong Law, Wan-Chi Siu, Alan Wee...
GPEM
2002
95views more  GPEM 2002»
15 years 5 months ago
On Appropriate Adaptation Levels for the Learning of Gene Linkage
A number of algorithms have been proposed aimed at tackling the problem of learning "Gene Linkage" within the context of genetic optimisation, that is to say, the problem...
James Smith