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BMCBI
2011
12 years 11 months ago
Clustering gene expression data with a penalized graph-based metric
Background: The search for cluster structure in microarray datasets is a base problem for the so-called “-omic sciences”. A difficult problem in clustering is how to handle da...
Ariel E. Bayá, Pablo M. Granitto
CPHYSICS
2006
182views more  CPHYSICS 2006»
13 years 7 months ago
MinFinder: Locating all the local minima of a function
A new stochastic clustering algorithm is introduced that aims to locate all the local minima of a multidimensional continuous and differentiable function inside a bounded domain. ...
Ioannis G. Tsoulos, Isaac E. Lagaris
BIOINFORMATICS
2010
109views more  BIOINFORMATICS 2010»
13 years 7 months ago
Phylogenetic networks do not need to be complex: using fewer reticulations to represent conflicting clusters
Phylogenetic trees are widely used to display estimates of how groups of species evolved. Each phylogenetic tree can be seen as a collection of clusters, subgroups of the species ...
Leo van Iersel, Steven Kelk, Regula Rupp, Daniel H...
PROCEDIA
2010
80views more  PROCEDIA 2010»
13 years 6 months ago
Visualising spins and clusters in regular and small-world Ising models with GPUs
Visualising computational simulation models of solid state physical systems is a hard problem for dense lattice models. Fly throughs and cutaways can aid viewer understanding of a...
Arno Leist, Daniel P. Playne, Kenneth A. Hawick
WCRE
2005
IEEE
14 years 1 months ago
When Functions Change Their Names: Automatic Detection of Origin Relationships
It is a common understanding that identifying the same entity such as module, file, and function between revisions is important for software evolution related analysis. Most softw...
Sunghun Kim, Kai Pan, E. James Whitehead Jr.