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SIGMOD
2010
ACM
221views Database» more  SIGMOD 2010»
13 years 9 months ago
Analyzing the energy efficiency of a database server
Rising energy costs in large data centers are driving an agenda for energy-efficient computing. In this paper, we focus on the role of database software in affecting, and, ultimat...
Dimitris Tsirogiannis, Stavros Harizopoulos, Mehul...
BMCBI
2010
148views more  BMCBI 2010»
13 years 9 months ago
Calling SNPs without a reference sequence
Background: The most common application for the next-generation sequencing technologies is resequencing, where short reads from the genome of an individual are aligned to a refere...
Aakrosh Ratan, Yu Zhang, Vanessa M. Hayes, Stephan...
BMCBI
2010
175views more  BMCBI 2010»
13 years 9 months ago
Calibur: a tool for clustering large numbers of protein decoys
Background: Ab initio protein structure prediction methods generate numerous structural candidates, which are referred to as decoys. The decoy with the most number of neighbors of...
Shuai Cheng Li, Yen Kaow Ng
BMCBI
2010
133views more  BMCBI 2010»
13 years 9 months ago
Stability analysis of the GAL regulatory network in Saccharomyces cerevisiae and Kluyveromyces lactis
Background: In the yeast Saccharomyces cerevisiae, interactions between galactose, Gal3p, Gal80p, and Gal4p determine the transcriptional status of the genes required for the gala...
Vishwesh V. Kulkarni, Venkatesh Kareenhalli, Pushk...
BMCBI
2007
128views more  BMCBI 2007»
13 years 9 months ago
Absolute estimation of initial concentrations of amplicon in a real-time RT-PCR process
Background: Since real time PCR was first developed, several approaches to estimating the initial quantity of template in an RT-PCR reaction have been tried. While initially only ...
Marjo V. Smith, Chris R. Miller, Michael Kohn, Nig...
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