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» The ed-tree: An Index for Large DNA Sequence Databases
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CDB
2004
Springer
172views Database» more  CDB 2004»
14 years 1 months ago
Constraint Database Solutions to the Genome Map Assembly Problem
Abstract. Long DNA sequences have to be cut using restriction enzymes into small fragments whose lengths and/or nucleotide sequences can be analyzed by currently available technolo...
Viswanathan Ramanathan, Peter Z. Revesz
FPL
2003
Springer
130views Hardware» more  FPL 2003»
14 years 24 days ago
A Smith-Waterman Systolic Cell
With an aim to understand the information encoded by DNA sequences, databases containing large amount of DNA sequence information are frequently compared and searched for matching ...
Chi Wai Yu, K. H. Kwong, Kin-Hong Lee, Philip Heng...
DEXA
1998
Springer
124views Database» more  DEXA 1998»
13 years 11 months ago
Indexing Time-Series Databases for Inverse Queries
Abstract. In this paper we examine the problem of indexing time sequences in order to answer inverse queries. An inverse query computes all the time points at which the sequence co...
Alexandros Nanopoulos, Yannis Manolopoulos
BIBE
2003
IEEE
116views Bioinformatics» more  BIBE 2003»
14 years 27 days ago
An Assessment of a Metric Space Database Index to Support Sequence Homology
Hierarchical metric-space clustering methods have been commonly used to organize proteomes into taxonomies. Consequently, it is often anticipated that hierarchical clustering can ...
Rui Mao, Weijia Xu, Neha Singh, Daniel P. Miranker
BTW
2007
Springer
292views Database» more  BTW 2007»
13 years 11 months ago
Effective and Efficient Indexing for Large Video Databases
Abstract: Content based multimedia retrieval is an important topic in database systems. An emerging and challenging topic in this area is the content based search in video data. A ...
Christian Böhm, Peter Kunath, Alexey Pryakhin...