Domain Interaction MAp (DIMA, available at http:// webclu.bio.wzw.tum.de/dima) is a database of predicted and known interactions between protein domains. It integrates 5807 struct...
Qibin Luo, Philipp Pagel, Baiba Vilne, Dmitrij Fri...
Supervised approaches to Data Mining are particularly appealing as they allow for the extraction of complex relations from data objects. In order to facilitate their application i...
Many machine learning applications that involve relational databases incorporate first-order logic and probability. Markov Logic Networks (MLNs) are a prominent statistical relati...
Hassan Khosravi, Oliver Schulte, Tong Man, Xiaoyua...
Background: Several entropy-based methods have been developed for scoring sequence conservation in protein multiple sequence alignments. High scoring amino acid positions may corr...
Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...