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BMCBI
2006
94views more  BMCBI 2006»
13 years 10 months ago
Simulation of microarray data with realistic characteristics
Background: Microarray technologies have become common tools in biological research. As a result, a need for effective computational methods for data analysis has emerged. Numerou...
Matti Nykter, Tommi Aho, Miika Ahdesmäki, Pek...
BMCBI
2006
117views more  BMCBI 2006»
13 years 10 months ago
Incorporating background frequency improves entropy-based residue conservation measures
Background: Several entropy-based methods have been developed for scoring sequence conservation in protein multiple sequence alignments. High scoring amino acid positions may corr...
Kai Wang, Ram Samudrala
CAGD
2006
103views more  CAGD 2006»
13 years 10 months ago
The implicit structure of ridges of a smooth parametric surface
Given a smooth surface, a blue (red) ridge is a curve such that at each of its points, the maximum (minimum) principal curvature has an extremum along its curvature line. Ridges a...
Frédéric Cazals, Jean-Charles Faug&e...
ENTCS
2006
117views more  ENTCS 2006»
13 years 10 months ago
A Formalization of Credit and Responsibility Within the GNDC Schema
We formally define a notion of credit and responsibility within the Generalized Non Deducibility on Compositions framework. We investigate the validity of our definitions through ...
Roberto Gorrieri, Fabio Martinelli, Marinella Petr...
BMCBI
2007
145views more  BMCBI 2007»
13 years 10 months ago
Improved benchmarks for computational motif discovery
Background: An important step in annotation of sequenced genomes is the identification of transcription factor binding sites. More than a hundred different computational methods h...
Geir Kjetil Sandve, Osman Abul, Vegard Walseng, Fi...
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