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» The meaning of alignment: lessons from structural diversity
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GECCO
2003
Springer
165views Optimization» more  GECCO 2003»
14 years 18 days ago
An Evolutionary Approach for Molecular Docking
We have developed an evolutionary approach for the flexible docking that is now an important component of a rational drug design. This automatic docking tool, referred to as the G...
Jinn-Moon Yang
BMCBI
2006
161views more  BMCBI 2006»
13 years 7 months ago
Comparative genomics in cyprinids: common carp ESTs help the annotation of the zebrafish genome
Background: Automatic annotation of sequenced eukaryotic genomes integrates a combination of methodologies such as ab-initio methods and alignment of homologous genes and/or prote...
Alan Christoffels, Richard Bartfai, Hamsa Srinivas...
PODC
2009
ACM
14 years 4 months ago
Memory models: a case for rethinking parallel languages and hardware
The era of parallel computing for the masses is here, but writing correct parallel programs remains far more difficult than writing sequential programs. Aside from a few domains,...
Sarita V. Adve
BMCBI
2008
132views more  BMCBI 2008»
13 years 7 months ago
The Average Mutual Information Profile as a Genomic Signature
Background: Occult organizational structures in DNA sequences may hold the key to understanding functional and evolutionary aspects of the DNA molecule. Such structures can also p...
Mark Bauer, Sheldon M. Schuster, Khalid Sayood
AAAI
2008
13 years 9 months ago
Cross-lingual Propagation for Morphological Analysis
Multilingual parallel text corpora provide a powerful means for propagating linguistic knowledge across languages. We present a model which jointly learns linguistic structure for...
Benjamin Snyder, Regina Barzilay