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RECOMB
2008
Springer
14 years 10 months ago
Integrating Sequence and Topology for Efficient and Accurate Detection of Horizontal Gene Transfer
Abstract. One phylogeny-based approach to horizontal gene transfer (HGT) detection entails comparing the topology of a gene tree to that of the species tree, and using their differ...
Cuong Than, Guohua Jin, Luay Nakhleh
RECOMB
2007
Springer
14 years 10 months ago
Association Mapping of Complex Diseases with Ancestral Recombination Graphs: Models and Efficient Algorithms
Association, or LD (linkage disequilibrium), mapping is an intensely-studied approach to gene mapping (genome-wide or in candidate regions) that is widely hoped to be able to effic...
Yufeng Wu
RECOMB
2005
Springer
14 years 10 months ago
Segmentation Conditional Random Fields (SCRFs): A New Approach for Protein Fold Recognition
Abstract. Protein fold recognition is an important step towards understanding protein three-dimensional structures and their functions. A conditional graphical model, i.e. segmenta...
Yan Liu, Jaime G. Carbonell, Peter Weigele, Vanath...
VLDB
2007
ACM
103views Database» more  VLDB 2007»
14 years 10 months ago
On the Production of Anorexic Plan Diagrams
A "plan diagram" is a pictorial enumeration of the execution plan choices of a database query optimizer over the relational selectivity space. We have shown recently tha...
Harish D., Pooja N. Darera, Jayant R. Haritsa
SIGMOD
2009
ACM
175views Database» more  SIGMOD 2009»
14 years 10 months ago
Ranking distributed probabilistic data
Ranking queries are essential tools to process large amounts of probabilistic data that encode exponentially many possible deterministic instances. In many applications where unce...
Feifei Li, Ke Yi, Jeffrey Jestes