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BMCBI
2005
82views more  BMCBI 2005»
13 years 7 months ago
A novel method for prokaryotic promoter prediction based on DNA stability
Background: In the post-genomic era, correct gene prediction has become one of the biggest challenges in genome annotation. Improved promoter prediction methods can be one step to...
Aditi Kanhere, Manju Bansal
TPDS
2008
134views more  TPDS 2008»
13 years 7 months ago
Extending the TokenCMP Cache Coherence Protocol for Low Overhead Fault Tolerance in CMP Architectures
It is widely accepted that transient failures will appear more frequently in chips designed in the near future due to several factors such as the increased integration scale. On th...
Ricardo Fernández Pascual, José M. G...
BMCBI
2011
12 years 11 months ago
Detection of Lineage-Specific Evolutionary Changes among Primate Species
Background: Comparison of the human genome with other primates offers the opportunity to detect evolutionary events that created the diverse phenotypes among the primate species. ...
Mihaela Pertea, Geo Pertea, Steven L. Salzberg
BMCBI
2007
148views more  BMCBI 2007»
13 years 7 months ago
WeederH: an algorithm for finding conserved regulatory motifs and regions in homologous sequences
Background: This work addresses the problem of detecting conserved transcription factor binding sites and in general regulatory regions through the analysis of sequences from homo...
Giulio Pavesi, Federico Zambelli, Graziano Pesole
SAC
2008
ACM
13 years 7 months ago
Removing useless variables in cost analysis of Java bytecode
Automatic cost analysis has interesting applications in the context of verification and certification of mobile code. For instance, the code receiver can use cost information in o...
Elvira Albert, Puri Arenas, Samir Genaim, Germ&aac...