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BMCBI
2010
93views more  BMCBI 2010»
15 years 6 months ago
HAT: Hypergeometric Analysis of Tiling-arrays with application to promoter-GeneChip data
Background: Tiling-arrays are applicable to multiple types of biological research questions. Due to its advantages (high sensitivity, resolution, unbiased), the technology is ofte...
Erdogan Taskesen, Renee Beekman, Jeroen de Ridder,...
BMCBI
2007
111views more  BMCBI 2007»
15 years 6 months ago
MotifCombinator: a web-based tool to search for combinations of cis-regulatory motifs
Background: A combination of multiple types of transcription factors and cis-regulatory elements is often required for gene expression in eukaryotes, and the combinatorial regulat...
Mamoru Kato, Tatsuhiko Tsunoda
CORR
2007
Springer
113views Education» more  CORR 2007»
15 years 6 months ago
Communication under Strong Asynchronism
We consider asynchronous communication over point-to-point discrete memoryless channels without feedback. The transmitter starts sending one block codeword at an instant that is u...
Aslan Tchamkerten, Venkat Chandar, Gregory W. Worn...
ECCC
2007
86views more  ECCC 2007»
15 years 6 months ago
Testing Halfspaces
This paper addresses the problem of testing whether a Boolean-valued function f is a halfspace, i.e. a function of the form f(x) = sgn(w·x−θ). We consider halfspaces over the ...
Kevin Matulef, Ryan O'Donnell, Ronitt Rubinfeld, R...
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BMCBI
2005
97views more  BMCBI 2005»
15 years 6 months ago
Evolutionary distance estimation and fidelity of pair wise sequence alignment
Background: Evolutionary distances are a critical measure in comparative genomics and molecular evolutionary biology. A simulation study was used to examine the effect of alignmen...
Michael S. Rosenberg