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BMCBI
2007
122views more  BMCBI 2007»
13 years 7 months ago
Dissecting complex transcriptional responses using pathway-level scores based on prior information
Background: The genomewide pattern of changes in mRNA expression measured using DNA microarrays is typically a complex superposition of the response of multiple regulatory pathway...
Harmen J. Bussemaker, Lucas D. Ward, André ...
BMCBI
2007
166views more  BMCBI 2007»
13 years 7 months ago
Data handling strategies for high throughput pyrosequencers
Background: New high throughput pyrosequencers such as the 454 Life Sciences GS 20 are capable of massively parallelizing DNA sequencing providing an unprecedented rate of output ...
Gabriele A. Trombetti, Raoul J. P. Bonnal, Ermanno...
BMCBI
2007
178views more  BMCBI 2007»
13 years 7 months ago
SVM clustering
Background: Support Vector Machines (SVMs) provide a powerful method for classification (supervised learning). Use of SVMs for clustering (unsupervised learning) is now being cons...
Stephen Winters-Hilt, Sam Merat
FUIN
2006
98views more  FUIN 2006»
13 years 7 months ago
On-line Approximate String Matching in Natural Language
We consider approximate pattern matching in natural language text. We use the words of the text as the alphabet, instead of the characters as in traditional string matching approac...
Kimmo Fredriksson
IJFCS
2006
110views more  IJFCS 2006»
13 years 7 months ago
Sat-based Model Checking for Region Automata
For successful software verification, model checkers must be capable of handling a large number of program variables. Traditional, BDD-based model checking is deficient in this re...
Fang Yu, Bow-Yaw Wang