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BMCBI
2011
13 years 1 months ago
Wavelet-based identification of DNA focal genomic aberrations from single nucleotide polymorphism arrays
Background: Copy number aberrations (CNAs) are an important molecular signature in cancer initiation, development, and progression. However, these aberrations span a wide range of...
Youngmi Hur, Hyunju Lee
BMCBI
2010
103views more  BMCBI 2010»
13 years 10 months ago
Nonparametric methods for the analysis of single-color pathogen microarrays
Background: The analysis of oligonucleotide microarray data in pathogen surveillance and discovery is a challenging task. Target template concentration, nucleic acid integrity, an...
Omar J. Jabado, Sean Conlan, P. Lan Quan, Jeffrey ...
BMCBI
2007
156views more  BMCBI 2007»
13 years 10 months ago
Large-scale clustering of CAGE tag expression data
Background: Recent analyses have suggested that many genes possess multiple transcription start sites (TSSs) that are differentially utilized in different tissues and cell lines. ...
Kazuro Shimokawa, Yuko Okamura-Oho, Takio Kurita, ...
DATAMINE
2008
137views more  DATAMINE 2008»
13 years 10 months ago
Two heads better than one: pattern discovery in time-evolving multi-aspect data
Abstract. Data stream values are often associated with multiple aspects. For example, each value observed at a given time-stamp from environmental sensors may have an associated ty...
Jimeng Sun, Charalampos E. Tsourakakis, Evan Hoke,...