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116
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BMCBI
2010
110views more  BMCBI 2010»
15 years 2 months ago
Towards the systematic discovery of signal transduction networks using phosphorylation dynamics data
Background: Phosphorylation is a ubiquitous and fundamental regulatory mechanism that controls signal transduction in living cells. The number of identified phosphoproteins and th...
Haruna Imamura, Nozomu Yachie, Rintaro Saito, Yasu...
236
Voted
BMCBI
2007
182views more  BMCBI 2007»
15 years 2 months ago
EDISA: extracting biclusters from multiple time-series of gene expression profiles
Background: Cells dynamically adapt their gene expression patterns in response to various stimuli. This response is orchestrated into a number of gene expression modules consistin...
Jochen Supper, Martin Strauch, Dierk Wanke, Klaus ...
111
Voted
BMCBI
2007
114views more  BMCBI 2007»
15 years 2 months ago
False occurrences of functional motifs in protein sequences highlight evolutionary constraints
Background: False occurrences of functional motifs in protein sequences can be considered as random events due solely to the sequence composition of a proteome. Here we use a nume...
Allegra Via, Pier Federico Gherardini, Enrico Ferr...
118
Voted
CORR
2010
Springer
77views Education» more  CORR 2010»
15 years 2 months ago
Stochastic Analysis of Non-slotted Aloha in Wireless Ad-Hoc Networks
: In this paper we propose two analytically tractable stochastic models of non-slotted Aloha for Mobile Ad-hoc NETworks (MANETs): one model assumes a static pattern of nodes while ...
Bartek Blaszczyszyn, Paul Mühlethaler
123
Voted
CORR
2008
Springer
128views Education» more  CORR 2008»
15 years 2 months ago
A Fast Generic Sequence Matching Algorithm
A string matching--and more generally, sequence matching--algorithm is presented that has a linear worst-case computing time bound, a low worst-case bound on the number of compari...
David R. Musser, Gor V. Nishanov