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» Tissue classification with gene expression profiles
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MDAI
2005
Springer
14 years 4 months ago
Cancer Prediction Using Diversity-Based Ensemble Genetic Programming
Combining a set of classifiers has often been exploited to improve the classification performance. Accurate as well as diverse base classifiers are prerequisite to construct a good...
Jin-Hyuk Hong, Sung-Bae Cho
BMCBI
2005
78views more  BMCBI 2005»
13 years 10 months ago
Correlation test to assess low-level processing of high-density oligonucleotide microarray data
Background: There are currently a number of competing techniques for low-level processing of oligonucleotide array data. The choice of technique has a profound effect on subsequen...
Alexander Ploner, Lance D. Miller, Per Hall, Jonas...
BMCBI
2007
123views more  BMCBI 2007»
13 years 11 months ago
Heritable clustering and pathway discovery in breast cancer integrating epigenetic and phenotypic data
Background: In order to recapitulate tumor progression pathways using epigenetic data, we developed novel clustering and pathway reconstruction algorithms, collectively referred t...
Zailong Wang, Pearlly Yan, Dustin P. Potter, Chari...
BMCBI
2006
181views more  BMCBI 2006»
13 years 11 months ago
Automatic pathway building in biological association networks
Background: Scientific literature is a source of the most reliable and comprehensive knowledge about molecular interaction networks. Formalization of this knowledge is necessary f...
Anton Yuryev, Zufar Mulyukov, Ekaterina Kotelnikov...
RECOMB
2010
Springer
14 years 19 days ago
Subnetwork State Functions Define Dysregulated Subnetworks in Cancer
Abstract. Emerging research demonstrates the potential of proteinprotein interaction (PPI) networks in uncovering the mechanistic bases of cancers, through identification of intera...
Salim A. Chowdhury, Rod K. Nibbe, Mark R. Chance, ...