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BMCBI
2006
118views more  BMCBI 2006»
13 years 8 months ago
Djinn Lite: a tool for customised gene transcript modelling, annotation-data enrichment and exploration
Background: There is an ever increasing rate of data made available on genetic variation, transcriptomes and proteomes. Similarly, a growing variety of bioinformatic programs are ...
Erdahl T. Teber, Edward Crawford, Kent B. Bolton, ...
PLDI
2005
ACM
14 years 2 months ago
Jungloid mining: helping to navigate the API jungle
Reuse of existing code from class libraries and frameworks is often difficult because APIs are complex and the client code required to use the APIs can be hard to write. We obser...
David Mandelin, Lin Xu, Rastislav Bodík, Do...
BMCBI
2007
147views more  BMCBI 2007»
13 years 8 months ago
Modeling biochemical transformation processes and information processing with Narrator
Background: Software tools that model and simulate the dynamics of biological processes and systems are becoming increasingly important. Some of these tools offer sophisticated gr...
Johannes J. Mandel, Hendrik Fuß, Niall M. Pa...
TACAS
2004
Springer
94views Algorithms» more  TACAS 2004»
14 years 1 months ago
A Tool for Checking ANSI-C Programs
Abstract. We present a tool for the formal verification of ANSI-C programs using Bounded Model Checking (BMC). The emphasis is on usability: the tool supports almost all ANSI-C la...
Edmund M. Clarke, Daniel Kroening, Flavio Lerda
QSIC
2005
IEEE
14 years 2 months ago
Towards Making Agent UML Practical: A Textual Notation and a Tool
Design notations play an important role in designing software. Agent UML (AUML), which extends the widelyused UML notation, has proposed a number of notations for modelling agent ...
Michael Winikoff