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BMCBI
2008
211views more  BMCBI 2008»
13 years 7 months ago
CPSP-tools - Exact and complete algorithms for high-throughput 3D lattice protein studies
Background: The principles of protein folding and evolution pose problems of very high inherent complexity. Often these problems are tackled using simplified protein models, e.g. ...
Martin Mann, Sebastian Will, Rolf Backofen
BMCBI
2008
127views more  BMCBI 2008»
13 years 7 months ago
AMMO-Prot: amine system project 3D-model finder
Background: Amines are biogenic amino acid derivatives, which play pleiotropic and very important yet complex roles in animal physiology. For many other relevant biomolecules, bio...
Ismael Navas Delgado, Raúl Montañez,...
CORR
2010
Springer
137views Education» more  CORR 2010»
13 years 7 months ago
Open Graphs and Monoidal Theories
String diagrams are a powerful tool for reasoning about physical processes, logic circuits, tensor networks, and many other compositional structures. The distinguishing feature of...
Lucas Dixon, Aleks Kissinger
ENTCS
2006
117views more  ENTCS 2006»
13 years 7 months ago
A Formalization of Credit and Responsibility Within the GNDC Schema
We formally define a notion of credit and responsibility within the Generalized Non Deducibility on Compositions framework. We investigate the validity of our definitions through ...
Roberto Gorrieri, Fabio Martinelli, Marinella Petr...
BMCBI
2007
182views more  BMCBI 2007»
13 years 7 months ago
Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data
Background: ChIP-chip data, which indicate binding of transcription factors (TFs) to DNA regions in vivo, are widely used to reconstruct transcriptional regulatory networks. Howev...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen