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    BMCBI
    2010
    159views more  BMCBI 2010»
    Predicting domain-domain interaction based on domain profiles with feature selection and support vector machines
    13 years 7 months ago
    Predicting domain-domain interaction based on domain profiles with feature selection and support vector machines
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    Background: Protein-protein interaction (PPI) plays essential roles in cellular functions. The cost, time and other limitations associated with the current experimental methods ha...
    Alvaro J. González, Li Liao
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    BMCBI
    2005
    198views more  BMCBI 2005»
    Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
    13 years 7 months ago
    Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
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    Background: The sequencing of the human genome has enabled us to access a comprehensive list of genes (both experimental and predicted) for further analysis. While a majority of t...
    Qicheng Ma, Gung-Wei Chirn, Richard Cai, Joseph D....
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    NAR
    2007
    128views more  NAR 2007»
    Berkeley Phylogenomics Group web servers: resources for structural phylogenomic analysis
    13 years 7 months ago
    Berkeley Phylogenomics Group web servers: resources for structural phylogenomic analysis
    Download  makana-test.berkeley.edu
    Phylogenomic analysis addresses the limitations of function prediction based on annotation transfer, and has been shown to enable the highest accuracy in prediction of protein mol...
    Jake Gunn Glanville, Dan Kirshner, Nandini Krishna...
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    IMSCCS
    2006
    IEEE
    112views Theoretical Computer Science» more  IMSCCS 2006»
    Identification of New Members of Hydrophobin Family Using Primary Structure Analysis
    14 years 1 months ago
    Identification of New Members of Hydrophobin Family Using Primary Structure Analysis
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    Background: Hydrophobins are fungal proteins that can turn into amphipathic membranes at hydrophilic/hydrophobic interfaces by self-assembly. The assemblages by Class I hydrophobi...
    Kuan Yang, Youping Deng, Chaoyang Zhang, Mohamed O...
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    NAR
    2011
    191views Computer Vision» more  NAR 2011»
    The protein common interface database (ProtCID) - a comprehensive database of interactions of homologous proteins in multiple cr
    12 years 10 months ago
    The protein common interface database (ProtCID) - a comprehensive database of interactions of homologous proteins in multiple cr
    Download  nar.oxfordjournals.org
    The protein common interface database (ProtCID) is a database that contains clusters of similar homodimeric and heterodimeric interfaces observed in multiple crystal forms (CFs). ...
    Qifang Xu, Roland L. Dunbrack Jr.
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