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BMCBI
2010
113views more  BMCBI 2010»
13 years 7 months ago
Efficient protein alignment algorithm for protein search
Background: Proteins show a great variety of 3D conformations, which can be used to infer their evolutionary relationship and to classify them into more general groups; therefore ...
Zaixin Lu, Zhiyu Zhao, Bin Fu
CC
2008
Springer
133views System Software» more  CC 2008»
13 years 7 months ago
Hardness Amplification via Space-Efficient Direct Products
We prove a version of the derandomized Direct Product lemma for deterministic space-bounded algorithms. Suppose a Boolean function g : {0, 1}n {0, 1} cannot be computed on more th...
Venkatesan Guruswami, Valentine Kabanets
JCB
2006
107views more  JCB 2006»
13 years 7 months ago
Maximum Likelihood Molecular Clock Comb: Analytic Solutions
Maximum likelihood (ML) is increasingly used as an optimality criterion for selecting evolutionary trees, but finding the global optimum is a hard computational task. Because no g...
Benny Chor, Amit Khetan, Sagi Snir
EOR
2007
85views more  EOR 2007»
13 years 7 months ago
Modeling and analysis of a supply-assembly-store chain
We consider a supply–assembly–store chain with produce-to-stock strategy, which comprises a set of component suppliers, a mixed-model assembly line with a constantly moving co...
Xiaobo Zhao, Deju Xu, Hanqin Zhang, Qi-Ming He
BMCBI
2004
123views more  BMCBI 2004»
13 years 7 months ago
Interaction profile-based protein classification of death domain
Background: The increasing number of protein sequences and 3D structure obtained from genomic initiatives is leading many of us to focus on proteomics, and to dedicate our experim...
Drew Lett, Michael Hsing, Frederic Pio