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    BMCBI
    2007
    169views more  BMCBI 2007»
    Transcriptional regulatory network refinement and quantification through kinetic modeling, gene expression microarray data and i
    13 years 8 months ago
    Transcriptional regulatory network refinement and quantification through kinetic modeling, gene expression microarray data and i
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    Background: Gene expression microarray and other multiplex data hold promise for addressing the challenges of cellular complexity, refined diagnoses and the discovery of well-targ...
    Abdallah Sayyed-Ahmad, Kagan Tuncay, Peter J. Orto...
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    BMCBI
    2007
    134views more  BMCBI 2007»
    Nearest Neighbor Networks: clustering expression data based on gene neighborhoods
    13 years 8 months ago
    Nearest Neighbor Networks: clustering expression data based on gene neighborhoods
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    Background: The availability of microarrays measuring thousands of genes simultaneously across hundreds of biological conditions represents an opportunity to understand both indiv...
    Curtis Huttenhower, Avi I. Flamholz, Jessica N. La...
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    CORR
    2010
    Springer
    130views Education» more  CORR 2010»
    Phase Transitions for Greedy Sparse Approximation Algorithms
    13 years 8 months ago
    Phase Transitions for Greedy Sparse Approximation Algorithms
    Download  www.math.grinnell.edu
    A major enterprise in compressed sensing and sparse approximation is the design and analysis of computationally tractable algorithms for recovering sparse, exact or approximate, s...
    Jeffrey D. Blanchard, Coralia Cartis, Jared Tanner...
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    BMCBI
    2006
    106views more  BMCBI 2006»
    Methodological study of affine transformations of gene expression data with proposed robust non-parametric multi-dimensional nor
    13 years 7 months ago
    Methodological study of affine transformations of gene expression data with proposed robust non-parametric multi-dimensional nor
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    Background: Low-level processing and normalization of microarray data are most important steps in microarray analysis, which have profound impact on downstream analysis. Multiple ...
    Henrik Bengtsson, Ola Hössjer
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    TJS
    2002
    105views more  TJS 2002»
    Design and Prototype of a Performance Tool Interface for OpenMP
    13 years 7 months ago
    Design and Prototype of a Performance Tool Interface for OpenMP
    Download  www.cs.uoregon.edu
    This paper proposes a performance tools interface for OpenMP, similar in spirit to the MPI profiling interface in its intent to define a clear and portable API that makes OpenMP ex...
    Bernd Mohr, Allen D. Malony, Sameer Shende, Felix ...
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