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BMCBI
2005
99views more  BMCBI 2005»
13 years 8 months ago
CGH-Profiler: Data mining based on genomic aberration profiles
Background: CGH-Profiler is a program that supports the analysis of genomic aberrations measured by Comparative Genomic Hybridisation (CGH). Comparative genomic hybridisation (CGH...
Falk Schubert, Bernhard Tausch, Stefan Joos, Rolan...
TKDE
2008
156views more  TKDE 2008»
13 years 8 months ago
A Framework for Mining Sequential Patterns from Spatio-Temporal Event Data Sets
Given a large spatio-temporal database of events, where each event consists of the fields event ID, time, location, and event type, mining spatio-temporal sequential patterns ident...
Yan Huang, Liqin Zhang, Pusheng Zhang
BMCBI
2005
113views more  BMCBI 2005»
13 years 8 months ago
Pathway level analysis of gene expression using singular value decomposition
Background: A promising direction in the analysis of gene expression focuses on the changes in expression of specific predefined sets of genes that are known in advance to be rela...
John K. Tomfohr, Jun Lu, Thomas B. Kepler
BMCBI
2005
98views more  BMCBI 2005»
13 years 8 months ago
InterferenceAnalyzer: Tools for the analysis and simulation of multi-locus genetic data
Background: Good statistical models for analyzing and simulating multilocus recombination data exist but are not accessible to many biologists because their use requires reasonabl...
Lalitha Viswanath, Elizabeth A. Housworth
BMCBI
2004
97views more  BMCBI 2004»
13 years 8 months ago
Global features of sequences of bacterial chromosomes, plasmids and phages revealed by analysis of oligonucleotide usage pattern
Background: Oligonucleotide frequencies were shown to be conserved signatures for bacterial genomes, however, the underlying constraints have yet not been resolved in detail. In t...
Oleg N. Reva, Burkhard Tümmler