Many areas of modern biology are concerned with the management, storage, visualization, comparison, and analysis of networks. For instance, networks are used to model signal trans...
Provenance in the context of workflows, both for the data they derive and for their specification, is an essential component to allow for result reproducibility, sharing, and know...
We propose a new method to build persistent suffix trees for indexing the genomic data. Our algorithm DiGeST (Disk-Based Genomic Suffix Tree) improves significantly over previous ...
Marina Barsky, Ulrike Stege, Alex Thomo, Chris Upt...
Building an XML store means finding solutions to the problems of representing, accessing, querying and updating XML data. The irregularity of both the structure and usage of XML, ...
This paper introduces an efficient algorithm for Producing Early Results in Multi-join query plans (PermJoin, for short). While most previous research focuses only on the
case of ...
Justin J. Levandoski, Mohamed E. Khalefa, Mohamed ...