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» Unfolding of Microarray Data
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BMCBI
2010
172views more  BMCBI 2010»
13 years 8 months ago
Comparison of evolutionary algorithms in gene regulatory network model inference
Background: The evolution of high throughput technologies that measure gene expression levels has created a data base for inferring GRNs (a process also known as reverse engineeri...
Alina Sîrbu, Heather J. Ruskin, Martin Crane
HICSS
2008
IEEE
215views Biometrics» more  HICSS 2008»
13 years 9 months ago
Harry Potter and the Meat-Filled Freezer: A Case Study of Spontaneous Usage of Visualization Tools
This paper is a report on early user activity in Many Eyes, a public web site where users may upload data, create visualizations, and carry on discussions. Since the site launched...
Fernanda B. Viégas, Martin Wattenberg, Matt...
BMCBI
2006
156views more  BMCBI 2006»
13 years 8 months ago
Bayesian models for pooling microarray studies with multiple sources of replications
Background: Biologists often conduct multiple but different cDNA microarray studies that all target the same biological system or pathway. Within each study, replicate slides with...
Erin M. Conlon, Joon J. Song, Jun S. Liu
ICIP
2009
IEEE
14 years 9 months ago
A Bio-inspired Cnn With Re-indexing Engine For Lossless Dna Microarray Compression And Segmentation
The DNA microarray images allow to analyze the natural gene expressions. In this paper we propose an advanced method to efficiently address the imaging storage as well as the perf...
ICML
2007
IEEE
14 years 8 months ago
Hybrid huberized support vector machines for microarray classification
The large number of genes and the relatively small number of samples are typical characteristics for microarray data. These characteristics pose challenges for both sample classif...
Li Wang, Ji Zhu, Hui Zou