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» Upper bounds on maximum likelihood for phylogenetic trees
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ICC
2007
IEEE
14 years 5 months ago
Statistical Pruning for Near Maximum Likelihood Detection of MIMO Systems
Abstract— We show a statistical pruning approach for maximum likelihood (ML) detection of multiple-input multiple-output (MIMO) systems. We present a general pruning strategy for...
Tao Cui, Tracey Ho, Chintha Tellambura
IPPS
2003
IEEE
14 years 4 months ago
Phylogenetic Tree Inference on PC Architectures with AxML/PAxML
Inference of phylogenetic trees comprising hundreds or even thousands of organisms based on the maximum likelihood method is computationally extremely expensive. In previous work,...
Alexandros Stamatakis, Thomas Ludwig 0002
GCB
2000
Springer
137views Biometrics» more  GCB 2000»
14 years 2 months ago
Detecting Sporadic Recombination in DNA Alignments with Hidden Markov Models
Conventional phylogenetic tree estimation methods assume that all sites in a DNA multiple alignment have the same evolutionary history. This assumption is violated in data sets fro...
Dirk Husmeier, Frank Wright
CCECE
2006
IEEE
14 years 4 months ago
Dynamic and Parallel Approaches to Optimal Evolutionary Tree Construction
Phylogenetic trees are commonly reconstructed based on hard optimization problems such as Maximum parsimony (MP) and Maximum likelihood (ML). Conventional MP heuristics for produc...
Anupam Bhattacharjee, Kazi Zakia Sultana, Zalia Sh...
IPPS
2007
IEEE
14 years 5 months ago
RAxML-Cell: Parallel Phylogenetic Tree Inference on the Cell Broadband Engine
Computational phylogeny is a challenging application even for the most powerful supercomputers. It is also an ideal candidate for benchmarking emerging multiprocessor architecture...
Filip Blagojevic, Alexandros Stamatakis, Christos ...