117 search results - page 21 / 24 » Using Hybrid Alignment for Iterative Sequence Database Searc... |
CPM
1999
Springer
13 years 12 months ago
1999
Springer
We address the problem of string matching on Ziv-Lempel compressed text. The goal is to search a pattern in a text without uncompressing it. This is a highly relevant issue to keep...
SASP
2009
IEEE
14 years 2 months ago
2009
IEEE
—This paper describes a multi-threaded parallel design and implementation of the Smith-Waterman (SM) algorithm on compute unified device architecture (CUDA)-compatible graphic pr...
IPPS
2005
IEEE
14 years 1 months ago
2005
IEEE
FROST (Fold Recognition-Oriented Search Tool) [6] is a software whose purpose is to assign a 3D structure to a protein sequence. It is based on a series of filters and uses a dat...
CLEF
2008
Springer
13 years 9 months ago
2008
Springer
This paper describes the participation of the Technical University of Catalonia in the CLEF 2008 Question Answering on Speech Transcripts track. We have participated in the Englis...
BMCBI
2005
13 years 7 months ago
2005
Background: Collections of transcription factor binding profiles (Transfac, Jaspar) are essential to identify regulatory elements in DNA sequences. Subsets of highly similar profi...