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ISMB
1998
13 years 9 months ago
Advanced Query Mechanisms for Biological Databases
Existing query interfaces for biological databases are either based on fixed forms or textual query languages. Users of a fixed form-based query interface are limited to performin...
I-Min A. Chen, Anthony Kosky, Victor M. Markowitz,...
BMCBI
2010
191views more  BMCBI 2010»
13 years 7 months ago
BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions
Background: Genome-scale metabolic reconstructions under the Constraint Based Reconstruction and Analysis (COBRA) framework are valuable tools for analyzing the metabolic capabili...
Jan Schellenberger, Junyoung O. Park, Tom M. Conra...
EUROSYS
2006
ACM
14 years 4 months ago
Solving the starting problem: device drivers as self-describing artifacts
Run-time conflicts can affect even the most rigorously tested software systems. A reliance on execution-based testing makes it prohibitively costly to test every possible interac...
Michael F. Spear, Tom Roeder, Orion Hodson, Galen ...
E4MAS
2006
Springer
13 years 11 months ago
Cognitive Stigmergy: Towards a Framework Based on Agents and Artifacts
Stigmergy has been adopted in MAS (multi-agent systems) and in other fields as a technique for realising forms of emergent coordination in societies composed by a large amount of a...
Alessandro Ricci, Andrea Omicini, Mirko Viroli, Lu...
CORR
2007
Springer
100views Education» more  CORR 2007»
13 years 7 months ago
Identifying statistical dependence in genomic sequences via mutual information estimates
Questions of understanding and quantifying the representation and amount of information in organisms have become a central part of biological research, as they potentially hold th...
H. M. Aktulga, I. Kontoyiannis, L. A. Lyznik, Luka...