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BMCBI
2008
122views more  BMCBI 2008»
13 years 11 months ago
Grammar-based distance in progressive multiple sequence alignment
Background: We propose a multiple sequence alignment (MSA) algorithm and compare the alignment-quality and execution-time of the proposed algorithm with that of existing algorithm...
David J. Russell, Hasan H. Otu, Khalid Sayood
BMCBI
2007
151views more  BMCBI 2007»
13 years 11 months ago
Minimus: a fast, lightweight genome assembler
Background: Genome assemblers have grown very large and complex in response to the need for algorithms to handle the challenges of large whole-genome sequencing projects. Many of ...
Daniel D. Sommer, Arthur L. Delcher, Steven L. Sal...
EUROSYS
2009
ACM
14 years 8 months ago
xCalls: safe I/O in memory transactions
Memory transactions, similar to database transactions, allow a programmer to focus on the logic of their program and let the system ensure that transactions are atomic and isolate...
Haris Volos, Andres Jaan Tack, Neelam Goyal, Micha...
CLUSTER
2009
IEEE
14 years 5 months ago
Analyzing massive astrophysical datasets: Can Pig/Hadoop or a relational DBMS help?
Abstract— As the datasets used to fuel modern scientific discovery grow increasingly large, they become increasingly difficult to manage using conventional software. Parallel d...
Sarah Loebman, Dylan Nunley, YongChul Kwon, Bill H...
INFFUS
2011
82views more  INFFUS 2011»
13 years 2 months ago
Joint ego-motion and road geometry estimation
We provide a sensor fusion framework for solving the problem of joint ego-motion and road geometry estimation. More specifically we employ a sensor fusion framework to make syste...
Christian Lundquist, Thomas B. Schön