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» Using Multiple Alignments to Improve Gene Prediction
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BIOCOMP
2006
15 years 5 months ago
A Heuristic Approach to Scoring Gene Clustering Algorithms
In the past decades, many clustering algorithms have been proposed for the analysis of gene expression data, but little guidance is available to help choose among them. Given the ...
Longde Yin, Chun-Hsi Huang
JSSPP
2004
Springer
15 years 9 months ago
Multi-toroidal Interconnects: Using Additional Communication Links to Improve Utilization of Parallel Computers
Three-dimensional torus is a common topology of network interconnects of multicomputers due to its simplicity and high scalability. A parallel job submitted to a three-dimensional...
Yariv Aridor, Tamar Domany, Oleg Goldshmidt, Edi S...
131
Voted
BMCBI
2007
162views more  BMCBI 2007»
15 years 3 months ago
Genome-wide identification of specific oligonucleotides using artificial neural network and computational genomic analysis
Background: Genome-wide identification of specific oligonucleotides (oligos) is a computationallyintensive task and is a requirement for designing microarray probes, primers, and ...
Chun-Chi Liu, Chin-Chung Lin, Ker-Chau Li, Wen-Shy...
BMCBI
2006
85views more  BMCBI 2006»
15 years 3 months ago
On single and multiple models of protein families for the detection of remote sequence relationships
Background: The detection of relationships between a protein sequence of unknown function and a sequence whose function has been characterised enables the transfer of functional a...
James A. Casbon, Mansoor A. S. Saqi
143
Voted
BMCBI
2007
117views more  BMCBI 2007»
15 years 3 months ago
Supervised multivariate analysis of sequence groups to identify specificity determining residues
Background: Proteins that evolve from a common ancestor can change functionality over time, and it is important to be able identify residues that cause this change. In this paper ...
Iain M. Wallace, Desmond G. Higgins